Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim30cD3YVI9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim30cD3YVI9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Gm28760-201ENSMUST00000185995 736 ntBASIC14.49□□□□□ -0.09
Trim30cD3YVI9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim30cD3YVI9 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.48□□□□□ -0.09
Trim30cD3YVI9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms