Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx8D3YU81 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Gm12490-201ENSMUST00000120255 560 ntBASIC14.05□□□□□ -0.16
Rfx8D3YU81 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.05□□□□□ -0.16
Rfx8D3YU81 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Gm2495-201ENSMUST00000191160 466 ntBASIC14.05□□□□□ -0.16
Rfx8D3YU81 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.05□□□□□ -0.16
Rfx8D3YU81 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.05□□□□□ -0.16
Rfx8D3YU81 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx8D3YU81 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.05□□□□□ -0.16
Rfx8D3YU81 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.04□□□□□ -0.16
Rfx8D3YU81 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.04□□□□□ -0.16
Rfx8D3YU81 Mir874-201ENSMUST00000104769 76 ntBASIC14.04□□□□□ -0.16
Rfx8D3YU81 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.04□□□□□ -0.16
Rfx8D3YU81 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rfx8D3YU81 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Gm12928-201ENSMUST00000117115 573 ntBASIC14.03□□□□□ -0.16
Rfx8D3YU81 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rfx8D3YU81 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.03□□□□□ -0.16
Rfx8D3YU81 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.03□□□□□ -0.16
Rfx8D3YU81 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfx8D3YU81 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfx8D3YU81 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.03□□□□□ -0.16
Rfx8D3YU81 Itm2b-204ENSMUST00000228637 783 ntBASIC14.03□□□□□ -0.16
Rfx8D3YU81 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx8D3YU81 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 114.3 ms