Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.7
Gm12887B1AVM1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Gm2651-201ENSMUST00000203560 838 ntBASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gm12887B1AVM1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms