Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Gm9211-201ENSMUST00000182882 975 ntBASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Spcs1-203ENSMUST00000226374 592 ntBASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Gm10051-201ENSMUST00000145209 414 ntBASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Gm5616-201ENSMUST00000165252 384 ntBASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Gm8741-201ENSMUST00000174736 384 ntBASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col4a6B1AVK5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.33□□□□□ -0.27
Col4a6B1AVK5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col4a6B1AVK5 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col4a6B1AVK5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.33□□□□□ -0.28
Col4a6B1AVK5 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col4a6B1AVK5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms