Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.17□□□□□ -0.62
Col6a4A2AX52 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.17□□□□□ -0.62
Col6a4A2AX52 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Gm16479-201ENSMUST00000121706 932 ntBASIC11.17□□□□□ -0.62
Col6a4A2AX52 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.17□□□□□ -0.62
Col6a4A2AX52 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.17□□□□□ -0.62
Col6a4A2AX52 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Gm5950-201ENSMUST00000213337 772 ntBASIC11.17□□□□□ -0.62
Col6a4A2AX52 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col6a4A2AX52 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Gm14130-201ENSMUST00000118417 987 ntBASIC11.16□□□□□ -0.62
Col6a4A2AX52 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.16□□□□□ -0.62
Col6a4A2AX52 Gm4768-201ENSMUST00000206199 686 ntBASIC11.16□□□□□ -0.62
Col6a4A2AX52 Gm44967-201ENSMUST00000207047 631 ntBASIC11.16□□□□□ -0.62
Col6a4A2AX52 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms