Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Tubb1A2AQ07 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.56□□□□□ -0.24
Tubb1A2AQ07 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Gm14057-201ENSMUST00000120631 482 ntBASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.56□□□□□ -0.24
Tubb1A2AQ07 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.56□□□□□ -0.24
Tubb1A2AQ07 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Tubb1A2AQ07 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.55□□□□□ -0.24
Tubb1A2AQ07 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb1A2AQ07 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms