Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm9002-201ENSMUST00000178437 499 ntBASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm24196-201ENSMUST00000179161 110 ntBASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm5356-201ENSMUST00000093326 615 ntBASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm13123-201ENSMUST00000122173 492 ntBASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm8213-201ENSMUST00000118191 441 ntBASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms