Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm8000-201ENSMUST00000188378 592 ntBASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm13385-201ENSMUST00000121089 220 ntBASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm43474-201ENSMUST00000196415 774 ntBASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 AC159376.1-201ENSMUST00000218504 630 ntBASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.12□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.12□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms