Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Mir6956-201ENSMUST00000183598 62 ntBASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav5-4A0A075B652 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Gm15240-201ENSMUST00000118156 720 ntBASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Gm17795-201ENSMUST00000214505 757 ntBASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms