Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb2S4R1M3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.27□□□□□ -0.29
H2afb2S4R1M3 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.27□□□□□ -0.29
H2afb2S4R1M3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.27□□□□□ -0.29
H2afb2S4R1M3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb2S4R1M3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms