Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mrpl40Q9Z2Q5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.33□□□□□ -0.28
Mrpl40Q9Z2Q5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.33□□□□□ -0.28
Mrpl40Q9Z2Q5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mrpl40Q9Z2Q5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Mrpl40Q9Z2Q5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mrpl40Q9Z2Q5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mrpl40Q9Z2Q5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Mrpl40Q9Z2Q5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Gm11524-201ENSMUST00000119349 807 ntBASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Gm15429-201ENSMUST00000151268 798 ntBASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Gm19078-201ENSMUST00000206311 727 ntBASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.32□□□□□ -0.28
Mrpl40Q9Z2Q5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Mir1894-201ENSMUST00000122802 81 ntBASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Gm17794-201ENSMUST00000220252 955 ntBASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Mir497b-201ENSMUST00000093601 125 ntBASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mrpl40Q9Z2Q5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mrpl40Q9Z2Q5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms