Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.77□□□□□ -0.36
Cldn9Q9Z0S7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn9Q9Z0S7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn9Q9Z0S7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cldn9Q9Z0S7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn9Q9Z0S7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn9Q9Z0S7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn9Q9Z0S7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn9Q9Z0S7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn9Q9Z0S7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn9Q9Z0S7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Cldn9Q9Z0S7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Gm15371-201ENSMUST00000117057 784 ntBASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Gm26315-201ENSMUST00000083890 321 ntBASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn9Q9Z0S7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Gm12341-201ENSMUST00000119724 503 ntBASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Mir6977-201ENSMUST00000184960 64 ntBASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Gm18307-201ENSMUST00000206864 949 ntBASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Cldn9Q9Z0S7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms