Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.87□□□□□ -0.03
AmfrQ9R049 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.87□□□□□ -0.03
AmfrQ9R049 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AmfrQ9R049 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
AmfrQ9R049 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AmfrQ9R049 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AmfrQ9R049 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
AmfrQ9R049 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.86□□□□□ -0.03
AmfrQ9R049 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AmfrQ9R049 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AmfrQ9R049 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
AmfrQ9R049 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
AmfrQ9R049 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.86□□□□□ -0.03
AmfrQ9R049 Gm12138-201ENSMUST00000122180 951 ntBASIC14.86□□□□□ -0.03
AmfrQ9R049 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.86□□□□□ -0.03
AmfrQ9R049 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.86□□□□□ -0.03
AmfrQ9R049 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AmfrQ9R049 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Gm27701-201ENSMUST00000184498 110 ntBASIC14.86□□□□□ -0.03
AmfrQ9R049 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.86□□□□□ -0.03
AmfrQ9R049 Gm45384-201ENSMUST00000210451 277 ntBASIC14.86□□□□□ -0.03
AmfrQ9R049 Gm7653-201ENSMUST00000214567 508 ntBASIC14.86□□□□□ -0.03
AmfrQ9R049 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.86□□□□□ -0.03
AmfrQ9R049 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AmfrQ9R049 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AmfrQ9R049 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AmfrQ9R049 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Gm15376-201ENSMUST00000122258 783 ntBASIC14.85□□□□□ -0.03
AmfrQ9R049 Gm12091-201ENSMUST00000146791 830 ntBASIC14.85□□□□□ -0.03
AmfrQ9R049 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Gm24447-201ENSMUST00000083977 338 ntBASIC14.85□□□□□ -0.03
AmfrQ9R049 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.85□□□□□ -0.03
AmfrQ9R049 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.85□□□□□ -0.03
AmfrQ9R049 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.85□□□□□ -0.03
AmfrQ9R049 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
AmfrQ9R049 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.85□□□□□ -0.03
AmfrQ9R049 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AmfrQ9R049 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
AmfrQ9R049 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
AmfrQ9R049 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms