Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Gm44397-201ENSMUST00000195950 113 ntBASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Gm7287-201ENSMUST00000205267 602 ntBASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clcf1Q9QZM3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Gm15770-201ENSMUST00000117498 584 ntBASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Gm44719-201ENSMUST00000206404 149 ntBASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clcf1Q9QZM3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clcf1Q9QZM3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms