Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Gm5745-201ENSMUST00000183748 313 ntBASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Gm7561-201ENSMUST00000211203 886 ntBASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Upk3aQ9JKX8 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Gm13123-201ENSMUST00000122173 492 ntBASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Gm27839-201ENSMUST00000184242 106 ntBASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.74□□□□□ -0.37
Upk3aQ9JKX8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms