Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Mospd4-201ENSMUST00000180618 576 ntBASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Gm6652-201ENSMUST00000186414 1070 ntBASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Gm37827-201ENSMUST00000194486 1542 ntBASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Gm45706-201ENSMUST00000213063 2136 ntBASIC18.09■□□□□ 0.49
Cpsf1Q9EPU4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Gm26083-201ENSMUST00000157904 193 ntBASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Gm2991-201ENSMUST00000173338 480 ntBASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Gm44364-201ENSMUST00000198368 141 ntBASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf1Q9EPU4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf1Q9EPU4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf1Q9EPU4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Gm27243-201ENSMUST00000183964 521 ntBASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Morn2-202ENSMUST00000227729 656 ntBASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms