Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Mir8117-201ENSMUST00000184773 107 ntBASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Gm15427-201ENSMUST00000117288 531 ntBASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn3Q9DCB1 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Gm6973-201ENSMUST00000117080 721 ntBASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Gm44124-201ENSMUST00000204159 472 ntBASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms