Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm5864-201ENSMUST00000202263 970 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sf3a3Q9D554 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.4□□□□□ -0.26
Sf3a3Q9D554 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Rpph1-201ENSMUST00000175096 319 ntBASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Gm37714-201ENSMUST00000194742 342 ntBASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.4□□□□□ -0.26
Sf3a3Q9D554 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sf3a3Q9D554 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.4□□□□□ -0.27
Sf3a3Q9D554 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms