Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.1□□□□□ -0.15
Gm3404Q9D506 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Gm38671-201ENSMUST00000200573 130 ntBASIC14.1□□□□□ -0.15
Gm3404Q9D506 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.1□□□□□ -0.15
Gm3404Q9D506 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.1□□□□□ -0.15
Gm3404Q9D506 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3404Q9D506 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.09□□□□□ -0.15
Gm3404Q9D506 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Gm15806-201ENSMUST00000120696 955 ntBASIC14.09□□□□□ -0.15
Gm3404Q9D506 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3404Q9D506 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3404Q9D506 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3404Q9D506 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3404Q9D506 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.08□□□□□ -0.16
Gm3404Q9D506 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.08□□□□□ -0.16
Gm3404Q9D506 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.08□□□□□ -0.16
Gm3404Q9D506 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Itm2b-204ENSMUST00000228637 783 ntBASIC14.08□□□□□ -0.16
Gm3404Q9D506 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3404Q9D506 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3404Q9D506 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3404Q9D506 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm3404Q9D506 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3404Q9D506 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3404Q9D506 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Gm3404Q9D506 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3404Q9D506 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms