Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 AY702102-202ENSMUST00000194651 1173 ntBASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Gm9396-201ENSMUST00000076703 567 ntBASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1aQ9CU62 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Gm27892-201ENSMUST00000185017 106 ntBASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1aQ9CU62 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Gm43630-201ENSMUST00000201550 776 ntBASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1aQ9CU62 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms