Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Gm2231-201ENSMUST00000125661 612 ntBASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Gm10478-201ENSMUST00000084451 396 ntBASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Gm10268-201ENSMUST00000085340 555 ntBASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.38□□□□□ -0.27
Lsm7Q9CQQ8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Mir874-201ENSMUST00000104769 76 ntBASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Gm13123-201ENSMUST00000122173 492 ntBASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm7Q9CQQ8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lsm7Q9CQQ8 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.36□□□□□ -0.27
Lsm7Q9CQQ8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm7Q9CQQ8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.36□□□□□ -0.27
Lsm7Q9CQQ8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm7Q9CQQ8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm7Q9CQQ8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm7Q9CQQ8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm7Q9CQQ8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm7Q9CQQ8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lsm7Q9CQQ8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms