Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Gm29396-201ENSMUST00000185659 716 ntBASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Prpf8Q99PV0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.89□□□□□ -0.67
Prpf8Q99PV0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Gm6334-201ENSMUST00000207083 228 ntBASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Gm7046-201ENSMUST00000221351 977 ntBASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prpf8Q99PV0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Gm3890-201ENSMUST00000182416 207 ntBASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prpf8Q99PV0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms