Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Mir5122-201ENSMUST00000175004 89 ntBASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Gm18165-201ENSMUST00000217426 928 ntBASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Gtf2a1Q99PM3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Gm7213-201ENSMUST00000215977 950 ntBASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Gm9182-201ENSMUST00000217829 639 ntBASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Gm18622-201ENSMUST00000219361 595 ntBASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.49□□□□□ -0.09
Gtf2a1Q99PM3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Gm15358-201ENSMUST00000119249 520 ntBASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Gm13135-201ENSMUST00000117628 3121 ntBASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gtf2a1Q99PM3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gtf2a1Q99PM3 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms