Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Gm43520-201ENSMUST00000197996 164 ntBASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Gm6867-201ENSMUST00000219165 425 ntBASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Mir7076-201ENSMUST00000183519 74 ntBASIC13.16□□□□□ -0.3
Cdh23Q99PF4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Gm17889-201ENSMUST00000198410 598 ntBASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh23Q99PF4 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Gm7902-201ENSMUST00000198842 947 ntBASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Ginm1-202ENSMUST00000065124 300 ntBASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Gm5616-201ENSMUST00000165252 384 ntBASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Gm8741-201ENSMUST00000174736 384 ntBASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.15□□□□□ -0.3
Cdh23Q99PF4 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh23Q99PF4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh23Q99PF4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh23Q99PF4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh23Q99PF4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh23Q99PF4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh23Q99PF4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh23Q99PF4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Gm27627-201ENSMUST00000183644 150 ntBASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh23Q99PF4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms