Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.07□□□□□ -0.16
Sf3b1Q99NB9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b1Q99NB9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b1Q99NB9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.07□□□□□ -0.16
Sf3b1Q99NB9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b1Q99NB9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b1Q99NB9 Gm9823-201ENSMUST00000051212 327 ntBASIC14.07□□□□□ -0.16
Sf3b1Q99NB9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b1Q99NB9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Sf3b1Q99NB9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b1Q99NB9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b1Q99NB9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Gm22018-201ENSMUST00000104357 131 ntBASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Gm2231-201ENSMUST00000125661 612 ntBASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Gm7029-201ENSMUST00000173226 450 ntBASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Gm19309-201ENSMUST00000218295 205 ntBASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Sf3b1Q99NB9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Gm25927-201ENSMUST00000175058 117 ntBASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b1Q99NB9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms