Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Acot6-202ENSMUST00000222921 3622 ntBASIC11.65□□□□□ -0.54
Scrt1Q99M85 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Gm13369-201ENSMUST00000119442 987 ntBASIC11.65□□□□□ -0.54
Scrt1Q99M85 Gm12176-201ENSMUST00000121420 875 ntBASIC11.65□□□□□ -0.54
Scrt1Q99M85 Gm10156-201ENSMUST00000122364 462 ntBASIC11.65□□□□□ -0.54
Scrt1Q99M85 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.65□□□□□ -0.54
Scrt1Q99M85 Gm18041-201ENSMUST00000218210 618 ntBASIC11.65□□□□□ -0.54
Scrt1Q99M85 Gm9368-201ENSMUST00000219348 831 ntBASIC11.65□□□□□ -0.54
Scrt1Q99M85 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.65□□□□□ -0.54
Scrt1Q99M85 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.65□□□□□ -0.54
Scrt1Q99M85 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.65□□□□□ -0.54
Scrt1Q99M85 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Scrt1Q99M85 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Scrt1Q99M85 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Scrt1Q99M85 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Scrt1Q99M85 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.55
Scrt1Q99M85 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Scrt1Q99M85 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.65□□□□□ -0.55
Scrt1Q99M85 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Scrt1Q99M85 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.64□□□□□ -0.55
Scrt1Q99M85 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Scrt1Q99M85 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.64□□□□□ -0.55
Scrt1Q99M85 Gm11793-201ENSMUST00000120433 981 ntBASIC11.64□□□□□ -0.55
Scrt1Q99M85 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Gm4271-201ENSMUST00000174444 973 ntBASIC11.64□□□□□ -0.55
Scrt1Q99M85 Mir7070-201ENSMUST00000183657 86 ntBASIC11.64□□□□□ -0.55
Scrt1Q99M85 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.64□□□□□ -0.55
Scrt1Q99M85 Gm43133-201ENSMUST00000197472 463 ntBASIC11.64□□□□□ -0.55
Scrt1Q99M85 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Olfr284-202ENSMUST00000206647 966 ntBASIC11.64□□□□□ -0.55
Scrt1Q99M85 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Scrt1Q99M85 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.64□□□□□ -0.55
Scrt1Q99M85 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.64□□□□□ -0.55
Scrt1Q99M85 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scrt1Q99M85 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.63□□□□□ -0.55
Scrt1Q99M85 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scrt1Q99M85 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.63□□□□□ -0.55
Scrt1Q99M85 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms