Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf1Q99LC2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf1Q99LC2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf1Q99LC2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf1Q99LC2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf1Q99LC2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cstf1Q99LC2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf1Q99LC2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf1Q99LC2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf1Q99LC2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf1Q99LC2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Gm13461-201ENSMUST00000120980 662 ntBASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 B9d1os-201ENSMUST00000137010 674 ntBASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.27□□□□□ -0.29
Cstf1Q99LC2 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf1Q99LC2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Gm14017-201ENSMUST00000121934 386 ntBASIC13.26□□□□□ -0.29
Cstf1Q99LC2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Gm37986-201ENSMUST00000193285 383 ntBASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.26□□□□□ -0.29
Cstf1Q99LC2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf1Q99LC2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms