Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Gm20949-201ENSMUST00000206478 952 ntBASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Gm45072-201ENSMUST00000208673 929 ntBASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Gm18049-201ENSMUST00000208909 581 ntBASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 CT025561.1-201ENSMUST00000214972 674 ntBASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb3Q91XZ7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms