Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Syt7-204ENSMUST00000223586 1344 ntBASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Gm16215-201ENSMUST00000161990 637 ntBASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Gm2423-201ENSMUST00000074863 733 ntBASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhga11Q91XY8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhga11Q91XY8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Syt7-205ENSMUST00000224135 1557 ntBASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms