Protein–RNA interactions for Protein: Q91XY7

Pcdhga12, Protocadherin gamma A12, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga12Q91XY7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Gm13829-201ENSMUST00000119600 138 ntBASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Gm8652-201ENSMUST00000181363 964 ntBASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Gm6266-201ENSMUST00000203844 806 ntBASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhga12Q91XY7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga12Q91XY7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Gm27847-201ENSMUST00000183711 107 ntBASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Gm27375-201ENSMUST00000183799 107 ntBASIC12.66□□□□□ -0.38
Pcdhga12Q91XY7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms