Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Gm13226-201ENSMUST00000117838 404 ntBASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Gm38671-201ENSMUST00000200573 130 ntBASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Gm42550-201ENSMUST00000201553 960 ntBASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx41Q91VN6 Gm37105-201ENSMUST00000192251 2085 ntBASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Gm43061-201ENSMUST00000198850 2241 ntBASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx41Q91VN6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx41Q91VN6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms