Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm19931-201ENSMUST00000198920 368 ntBASIC13.75□□□□□ -0.21
Trim60Q8VI40 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim60Q8VI40 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.75□□□□□ -0.21
Trim60Q8VI40 Gm9063-201ENSMUST00000223299 582 ntBASIC13.75□□□□□ -0.21
Trim60Q8VI40 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Trim60Q8VI40 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim60Q8VI40 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm12403-201ENSMUST00000121384 959 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim60Q8VI40 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.74□□□□□ -0.21
Trim60Q8VI40 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim60Q8VI40 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trim60Q8VI40 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Gm15920-201ENSMUST00000118998 402 ntBASIC13.73□□□□□ -0.21
Trim60Q8VI40 Gm12485-201ENSMUST00000119641 291 ntBASIC13.73□□□□□ -0.21
Trim60Q8VI40 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.73□□□□□ -0.21
Trim60Q8VI40 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms