Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Q8VDP2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q8VDP2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q8VDP2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q8VDP2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q8VDP2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q8VDP2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Q8VDP2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Q8VDP2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Q8VDP2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q8VDP2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q8VDP2 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Q8VDP2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Q8VDP2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q8VDP2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Q8VDP2 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.92□□□□□ -0.34
Q8VDP2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Q8VDP2 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.92□□□□□ -0.34
Q8VDP2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Q8VDP2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Q8VDP2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Gm4459-201ENSMUST00000118750 468 ntBASIC12.92□□□□□ -0.34
Q8VDP2 Gm13418-201ENSMUST00000119097 944 ntBASIC12.92□□□□□ -0.34
Q8VDP2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Gm25406-201ENSMUST00000157599 105 ntBASIC12.92□□□□□ -0.34
Q8VDP2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.92□□□□□ -0.34
Q8VDP2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.92□□□□□ -0.34
Q8VDP2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.92□□□□□ -0.34
Q8VDP2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Gm5867-201ENSMUST00000063197 592 ntBASIC12.92□□□□□ -0.34
Q8VDP2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Q8VDP2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Q8VDP2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q8VDP2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Q8VDP2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Q8VDP2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Q8VDP2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.91□□□□□ -0.34
Q8VDP2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.91□□□□□ -0.34
Q8VDP2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.91□□□□□ -0.34
Q8VDP2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.91□□□□□ -0.34
Q8VDP2 Gm8097-201ENSMUST00000117903 829 ntBASIC12.91□□□□□ -0.34
Q8VDP2 Gm12350-201ENSMUST00000121208 462 ntBASIC12.91□□□□□ -0.34
Q8VDP2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Q8VDP2 Gm15173-201ENSMUST00000122049 433 ntBASIC12.91□□□□□ -0.34
Q8VDP2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Q8VDP2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.91□□□□□ -0.34
Q8VDP2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.91□□□□□ -0.34
Q8VDP2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.91□□□□□ -0.34
Q8VDP2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.91□□□□□ -0.34
Q8VDP2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q8VDP2 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.91□□□□□ -0.34
Q8VDP2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Q8VDP2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Q8VDP2 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.9□□□□□ -0.34
Q8VDP2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Q8VDP2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms