Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Gm9824-201ENSMUST00000178707 561 ntBASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Mzt1-203ENSMUST00000227948 952 ntBASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Gm25287-201ENSMUST00000103846 110 ntBASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Gm22918-201ENSMUST00000103855 110 ntBASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Gm13015-201ENSMUST00000118674 204 ntBASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Gm9719-201ENSMUST00000162765 543 ntBASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Mir497b-201ENSMUST00000093601 125 ntBASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc58Q8R3Q6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc58Q8R3Q6 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc58Q8R3Q6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms