Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.4□□□□□ -0.26
Clip4Q8CI96 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Clip4Q8CI96 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.39□□□□□ -0.27
Clip4Q8CI96 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Mir6392-201ENSMUST00000184924 108 ntBASIC13.39□□□□□ -0.27
Clip4Q8CI96 Gm8515-201ENSMUST00000194852 576 ntBASIC13.39□□□□□ -0.27
Clip4Q8CI96 Gm9794-201ENSMUST00000202370 423 ntBASIC13.39□□□□□ -0.27
Clip4Q8CI96 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Gm6180-201ENSMUST00000065243 498 ntBASIC13.39□□□□□ -0.27
Clip4Q8CI96 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.39□□□□□ -0.27
Clip4Q8CI96 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clip4Q8CI96 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.38□□□□□ -0.27
Clip4Q8CI96 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.38□□□□□ -0.27
Clip4Q8CI96 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.38□□□□□ -0.27
Clip4Q8CI96 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Gm23984-201ENSMUST00000157139 203 ntBASIC13.38□□□□□ -0.27
Clip4Q8CI96 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Clip4Q8CI96 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.38□□□□□ -0.27
Clip4Q8CI96 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.38□□□□□ -0.27
Clip4Q8CI96 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clip4Q8CI96 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clip4Q8CI96 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Clip4Q8CI96 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms