Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps50Q8CI71 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps50Q8CI71 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vps50Q8CI71 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Vps50Q8CI71 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps50Q8CI71 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps50Q8CI71 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps50Q8CI71 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.1□□□□□ -0.31
Vps50Q8CI71 Gm18018-201ENSMUST00000198273 408 ntBASIC13.1□□□□□ -0.31
Vps50Q8CI71 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.1□□□□□ -0.31
Vps50Q8CI71 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.1□□□□□ -0.31
Vps50Q8CI71 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps50Q8CI71 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Gm9794-201ENSMUST00000202370 423 ntBASIC13.09□□□□□ -0.31
Vps50Q8CI71 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.09□□□□□ -0.31
Vps50Q8CI71 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.09□□□□□ -0.31
Vps50Q8CI71 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps50Q8CI71 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps50Q8CI71 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps50Q8CI71 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Vps50Q8CI71 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps50Q8CI71 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Vps50Q8CI71 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps50Q8CI71 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps50Q8CI71 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps50Q8CI71 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps50Q8CI71 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps50Q8CI71 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps50Q8CI71 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms