Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.42■□□□□ 0.22
Smc5Q8CG46 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.41■□□□□ 0.22
Smc5Q8CG46 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Gm11524-201ENSMUST00000119349 807 ntBASIC16.41■□□□□ 0.22
Smc5Q8CG46 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Gm5279-201ENSMUST00000199575 745 ntBASIC16.41■□□□□ 0.22
Smc5Q8CG46 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.41■□□□□ 0.22
Smc5Q8CG46 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.41■□□□□ 0.22
Smc5Q8CG46 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.41■□□□□ 0.22
Smc5Q8CG46 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 AC123834.1-201ENSMUST00000225346 2043 ntBASIC16.41■□□□□ 0.22
Smc5Q8CG46 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smc5Q8CG46 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.4■□□□□ 0.22
Smc5Q8CG46 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Smc5Q8CG46 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.4■□□□□ 0.22
Smc5Q8CG46 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc5Q8CG46 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Smc5Q8CG46 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Smc5Q8CG46 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Smc5Q8CG46 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Smc5Q8CG46 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Gm6447-201ENSMUST00000118905 835 ntBASIC16.39■□□□□ 0.21
Smc5Q8CG46 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Gm29667-201ENSMUST00000190817 490 ntBASIC16.39■□□□□ 0.21
Smc5Q8CG46 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.39■□□□□ 0.21
Smc5Q8CG46 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smc5Q8CG46 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms