Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Mir698-201ENSMUST00000102164 109 ntBASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.68■□□□□ 0.1
Nup88Q8CEC0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.68■□□□□ 0.1
Nup88Q8CEC0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.67■□□□□ 0.1
Nup88Q8CEC0 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.67■□□□□ 0.1
Nup88Q8CEC0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nup88Q8CEC0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Mir1894-201ENSMUST00000122802 81 ntBASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup88Q8CEC0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup88Q8CEC0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup88Q8CEC0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup88Q8CEC0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup88Q8CEC0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup88Q8CEC0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup88Q8CEC0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.65■□□□□ 0.1
Nup88Q8CEC0 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.65■□□□□ 0.1
Nup88Q8CEC0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms