Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
Ccdc87Q8CDL9 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Gm5866-201ENSMUST00000177881 973 ntBASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Syt7-204ENSMUST00000223586 1344 ntBASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc87Q8CDL9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Gm15770-201ENSMUST00000117498 584 ntBASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms