Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Gm37859-201ENSMUST00000195529 2173 ntBASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pabpn1Q8CCS6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Pabpn1Q8CCS6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pabpn1Q8CCS6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pabpn1Q8CCS6 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC20.08■□□□□ 0.8
Pabpn1Q8CCS6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.8
Pabpn1Q8CCS6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pabpn1Q8CCS6 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pabpn1Q8CCS6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pabpn1Q8CCS6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pabpn1Q8CCS6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pabpn1Q8CCS6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Gm27530-201ENSMUST00000184096 98 ntBASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Gm17877-201ENSMUST00000192578 814 ntBASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Gm2965-201ENSMUST00000198365 343 ntBASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Gm18460-201ENSMUST00000208088 464 ntBASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Gm4604-201ENSMUST00000025040 390 ntBASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pabpn1Q8CCS6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Gm11949-201ENSMUST00000117640 372 ntBASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Gm8737-201ENSMUST00000122208 642 ntBASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Gm10731-201ENSMUST00000181171 448 ntBASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Gm26989-201ENSMUST00000182608 749 ntBASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Mir8115-201ENSMUST00000184992 119 ntBASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 CT030135.2-201ENSMUST00000225255 893 ntBASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pabpn1Q8CCS6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms