Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lysmd4Q8CC84 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm4995-201ENSMUST00000117247 432 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm12403-201ENSMUST00000121384 959 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm27533-201ENSMUST00000183800 152 ntBASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lysmd4Q8CC84 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lysmd4Q8CC84 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lysmd4Q8CC84 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.9□□□□□ -0.51
Lysmd4Q8CC84 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Gm12585-201ENSMUST00000117307 290 ntBASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Gm15693-201ENSMUST00000120470 637 ntBASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Gm14822-201ENSMUST00000122247 291 ntBASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Gm19931-201ENSMUST00000198920 368 ntBASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms