Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Gm6458-201ENSMUST00000211573 635 ntBASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Gm9368-201ENSMUST00000219348 831 ntBASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933409G03RikQ8C5U0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
4933409G03RikQ8C5U0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Gm12241-201ENSMUST00000118330 726 ntBASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Gm13342-201ENSMUST00000121055 207 ntBASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Gm29396-201ENSMUST00000185659 716 ntBASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Gm9257-201ENSMUST00000221254 232 ntBASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
4933409G03RikQ8C5U0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
4933409G03RikQ8C5U0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
4933409G03RikQ8C5U0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
4933409G03RikQ8C5U0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
4933409G03RikQ8C5U0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
4933409G03RikQ8C5U0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
4933409G03RikQ8C5U0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
4933409G03RikQ8C5U0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
4933409G03RikQ8C5U0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms