Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Gm17794-201ENSMUST00000220252 955 ntBASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc60Q8C4J0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc60Q8C4J0 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gm11803-201ENSMUST00000119966 444 ntBASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gm27839-201ENSMUST00000184242 106 ntBASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gm10012-201ENSMUST00000078252 192 ntBASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc60Q8C4J0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc60Q8C4J0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Ccdc60Q8C4J0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Ccdc60Q8C4J0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc60Q8C4J0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms