Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Gm18307-201ENSMUST00000206864 949 ntBASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf3Q8C120 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Mir7654-201ENSMUST00000185082 70 ntBASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Gm42550-201ENSMUST00000201553 960 ntBASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf3Q8C120 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.83□□□□□ -0.19
Sh3rf3Q8C120 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sh3rf3Q8C120 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sh3rf3Q8C120 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sh3rf3Q8C120 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sh3rf3Q8C120 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sh3rf3Q8C120 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms