Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Gm12341-201ENSMUST00000119724 503 ntBASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Gm18018-201ENSMUST00000198273 408 ntBASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Cpsf4Q8BQZ5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Gm12091-201ENSMUST00000146791 830 ntBASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Gm43094-201ENSMUST00000196549 921 ntBASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Gm19220-201ENSMUST00000222682 803 ntBASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.88□□□□□ -0.35
Cpsf4Q8BQZ5 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Gm15678-201ENSMUST00000117573 960 ntBASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms