Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm23935-201ENSMUST00000102303 57 ntBASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm24270-201ENSMUST00000102326 57 ntBASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm15240-201ENSMUST00000118156 720 ntBASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm24245-201ENSMUST00000157318 57 ntBASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm26308-201ENSMUST00000157768 69 ntBASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm27321-201ENSMUST00000185021 205 ntBASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm17837-201ENSMUST00000186435 985 ntBASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Gm43575-201ENSMUST00000196420 516 ntBASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.62□□□□□ -0.23
Chmp2bQ8BJF9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Gm4875-201ENSMUST00000118257 786 ntBASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2bQ8BJF9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms