Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh20Q8BIZ0 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.99□□□□□ -0.33
Pcdh20Q8BIZ0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh20Q8BIZ0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh20Q8BIZ0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh20Q8BIZ0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Gm6912-201ENSMUST00000117218 544 ntBASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Gm29741-201ENSMUST00000192667 421 ntBASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh20Q8BIZ0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms