Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Gm12485-201ENSMUST00000119641 291 ntBASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Gm28631-201ENSMUST00000190740 334 ntBASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Gm44855-201ENSMUST00000205725 362 ntBASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Gm19078-201ENSMUST00000206311 727 ntBASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Gm5161-201ENSMUST00000075243 853 ntBASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn3Q8BHH8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Gm7488-201ENSMUST00000117148 684 ntBASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Syt7-205ENSMUST00000224135 1557 ntBASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn3Q8BHH8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Gm5866-201ENSMUST00000177881 973 ntBASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Gm38144-201ENSMUST00000192790 465 ntBASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Gm43094-201ENSMUST00000196549 921 ntBASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms