Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm22018-201ENSMUST00000104357 131 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm27501-201ENSMUST00000183599 107 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm27516-201ENSMUST00000184237 98 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm37922-201ENSMUST00000195596 455 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm37497-201ENSMUST00000195830 798 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm42627-201ENSMUST00000197347 224 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm3961-201ENSMUST00000204425 994 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm16372-201ENSMUST00000073088 450 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pif1Q80SX8 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.29□□□□□ -0.44
Pif1Q80SX8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.28□□□□□ -0.44
Pif1Q80SX8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Mir8109-201ENSMUST00000184375 117 ntBASIC12.28□□□□□ -0.44
Pif1Q80SX8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Snora73a-201ENSMUST00000082453 205 ntBASIC12.28□□□□□ -0.44
Pif1Q80SX8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms