Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Gm13392-201ENSMUST00000117708 150 ntBASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Gm10156-201ENSMUST00000122364 462 ntBASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Gm27331-201ENSMUST00000183705 60 ntBASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Gm5370-201ENSMUST00000187187 574 ntBASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh8Q7TSK3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gm12203-201ENSMUST00000118235 598 ntBASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gm12209-201ENSMUST00000120089 596 ntBASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gm16177-201ENSMUST00000120728 718 ntBASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gm42693-201ENSMUST00000196779 631 ntBASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh8Q7TSK3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh8Q7TSK3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh8Q7TSK3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Pcdh8Q7TSK3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh8Q7TSK3 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.08□□□□□ -0.31
Pcdh8Q7TSK3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh8Q7TSK3 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.08□□□□□ -0.31
Pcdh8Q7TSK3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Pcdh8Q7TSK3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh8Q7TSK3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh8Q7TSK3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh8Q7TSK3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh8Q7TSK3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms